Fine-Grained Hierarchical Progressive Modal-Aware Network for Brain Tumor Segmentation.

in IEEE journal of biomedical and health informatics by Chenggang Lu, Jianwei Zhang, Dan Zhang, Lei Mou, Jinli Yuan, Kewen Xia, Zhitao Guo, Jiong Zhang

TLDR

  • The study presents FiHam, a novel network architecture for accurate segmentation of brain tumors from multi-modal MRI sequences.
  • FiHam achieves state-of-the-art performance by leveraging progressive fusion and gated cross-attention modal-fusion mechanisms.
  • The network has significant implications for improving brain tumor diagnosis and treatment.

Abstract

Brain tumors are highly lethal and debilitating pathological changes that require timely diagnosis and treatment. Magnetic resonance imaging (MRI), a non-invasive diagnostic tool, provides complementary multi-modal information crucial for accurate tumor detection and delineation. However, existing methods struggle to effectively fuse multi-modal information from MRI sequences and often fail to perform modality-specific feature extraction, which hinders accurate tumor segmentation. Furthermore, the inherent challenges posed by the blurred boundaries and complex morphological characteristics of tumor structures present additional substantial obstacles to achieving precise segmentation. To address these issues, we propose FiHam, a fine-grained hierarchical progressive modal-aware network that introduces a novel multi-modal fusion strategy and an advanced feature extraction mechanism. Specifically, FiHam employs a progressive fusion strategy that extracts modality-specific features at lower levels and integrates multi-modal features at higher levels to effectively leverage complementary information from tumor images. Additionally, we design a gated cross-attention modal-fusion module that adaptively selects and integrates dual-modal features using cross-attention mechanisms to enhance modality fusion. To further refine segmentation accuracy, we incorporate a tiny U-Net into the encoder to capture boundary features and complex tumor morphology. Extensive experiments on three large-scale, multi-modal brain tumor datasets demonstrate that FiHam achieves state-of-the-art performance, delivering significant improvements in segmentation accuracy and generalizability across diverse MRI modalities.

Overview

  • The study focuses on developing a novel network architecture, FiHam, to accurately segment brain tumors from multi-modal MRI sequences.
  • The network addresses the challenges of insufficient feature extraction and modal fusion by introducing a progressive fusion strategy and gated cross-attention modal-fusion module.
  • The primary objective of the study is to achieve accurate tumor segmentation and improve generalizability across diverse MRI modalities.

Comparative Analysis & Findings

  • The proposed FiHam network outperforms existing methods in terms of segmentation accuracy and generalizability across three large-scale, multi-modal brain tumor datasets.
  • The network's progressive fusion strategy effectively leverages complementary information from tumor images, leading to improved segmentation accuracy.
  • The gated cross-attention modal-fusion module enhances modality fusion by adaptively selecting and integrating dual-modal features.

Implications and Future Directions

  • The proposed FiHam network has significant implications for improving the diagnosis and treatment of brain tumors, especially in cases where precise tumor segmentation is crucial.
  • Future research directions may include exploring the network's performance on other medical imaging modalities and scenarios.
  • The inclusion of domain adaptation methods could further improve the network's generalizability to unseen datasets and modalities.